No packages match
mariner - Mariner: Explore the Hi-Cs
Tools for manipulating paired ranges and working with Hi-C data in R. Functionality includes manipulating/merging paired regions, generating paired ranges, extracting/aggregating interactions from `.hic` files, and visualizing the results. Designed for compatibility with plotgardener for visualization.
Last updated
functionalgenomicsvisualizationhic
6.27 score 12 stars 260 scripts 425 downloadsmarinerData - ExperimentHub data for the mariner package
Subsampled Hi-C in HEK cells expressing the NHA9 fusion with an F to S mutated IDR ("FS") or without any mutations to the IDR ("Wildtype" or "WT"). These files are used for testing mariner functions and some examples.
Last updated
experimenthubexperimentdatasequencingdatadatapkg
3.32 score 21 scripts